Publications

Publications from VILLUM FONDEN sponge project (2015-2019), inclusive of BSc, MSc & PhD thesis

Asadzadeh SS, Nielsen LT, Andersen A, Dölger J, Kiørboe T, Larsen PS, ... Walther JH. (2019). Hydrodynamic functionality of the lorica in choanoflagellates. Journal of the Royal Society Interface, 16, pp. 20180478.

Asadzadeh SS, Larsen PS, Riisgård HU, Walther JH. (2019). Hydrodynamics of the leucon sponge pump. Journal of the Royal Society Interface, 16(150), pp. 20180630. doi: 10.1098/rsif.2018.0630

Asadzadeh SS. (2019). Numerical and experimental study of flow in choanoflagellates and choanocytes. PhD thesis, DTU Copenhagen.

Bisbo N. (2017). A study on the functional morphology of the pump and filtration apparatus of the marine demosponge, Halichondria panicea. BSc thesis, Aarhus University.

Bisbo N. (2019). The phylogeny of Demospongiae (Porifera) in the light of the functional morphology of the aquiferous system. MSc thesis, Aarhus University.

Busk T. (2018). Filtration rates in single-osculum sponge explants, with emphasis on the importance of osculum and sponge module size. BSc thesis, University of Southern Denmark.

Callesen Madsen J. (2019). Unintentional movement of sponge species through marine ornamental trade. BSc thesis, Aarhus University.

Eriksen NT, Tophøj J, Wollenberg RD, Søndergaard TE, Funch P, Andersen P. (2019). Growth and single cell kinetics of the loricate choanoflagellate Diphanoeca grandis. Scientific Reports, 9, pp. 14543. doi: 10.1038/s41598-019-50998-0

Fenchel T. (2017). The Choanoflagellates: Evolution, Biology and Ecology . By Barry S. C. Leadbeater. Cambridge and New York: Cambridge University Press. $125.00. xiii + 315 p.; ill.; choanoflagellate species index, other species index, general index. ISBN: 978-0-521-88444-0. 2015. The Quarterly Review of Biology, (1), doi: 10.1086/690889

Fenchel T. (2019). Filter-feeding in colonial protists. Protist, 170, pp. 283-286.

Frilund J. (2017). Comparison of Km values between sponges and the choanoflagellate Salpingoeca rosetta. BSc thesis, University of Southern Denmark.

Gadour M. (2019). Contractile behaviour of the demosponge Halichondria panicea due to overloading with re-suspended sediment. MSc thesis (ERASMUS), University of Nantes.

Goldstein J, Riisgård HU, Larsen PS. (2019). Exhalant jet speed of single-osculum explants of the demosponge Halichondria panicea and basic properties of the sponge-pump. Journal of Experimental Marine Biology and Ecology, 511, pp. 82-90. doi: 10.1016/j.jembe.2018.11.009

González-Aravena M, Kenny NJ, Osorio M, Font A, Riesgo A, Cárdenas CA. (2019). Warm temperatures, cool sponges: the effect of increased temperatures on the Antarctic sponge Isodictya sp. PeerJ, 7, pp. e8088. doi: 10.7717/peerj.8088

Halldorson AO. (2018). Fluid dynamics of sea sponges: Estimating exhalant jet velocity under varying ambient flow velocity. MSc thesis, DTU Copenhagen.

Hansen KH. (2017). Sensitivity of the demosponge Halichondria panicea to laboratory versus field conditions, using filtration activity as indicator. BSc thesis, University of Southern Denmark.

Kealy RA, Busk T, Goldstein J, Larsen PS, Riisgård HU, Larsen PS. (2019). Hydrodynamic characteristics of aquiferous modules in the demosponge Halichondria panicea. Marine Biology Research, 15(10), pp. 531-540. doi: 10.1080/17451000.2019.1694691

Kealy RA. (2017). Contraction-inflation behavior of small single-osculum explants of the demosponge Halichondria panicea - a mechanism to protect the sponge filter-pump? MSc thesis, University of Southern Denmark.

Keller Lees M. (2019). Capture and translocation of microplastic particles in the aquiferous system of the marine demosponge Halichondria panicea. BSc thesis, University of Southern Denmark.

Kumala L, Riisgård HU, Canfield D. (2017). Osculum dynamics and filtration activity in small single-osculum explants of the demosponge Halichondria panicea. Marine Ecology Progress Series, 572, pp. 117-128. doi: 10.3354/meps12155

Kumala L, Canfield DE. (2018). Contraction dynamics and respiration of small single-osculum explants of the demosponge Halichondria panicea. Frontiers in Marine Science, 5, pp. 410. doi: 10.3389/fmars.2018.00410

Larsen JMD. (2017). Contraction-inflation behavior of small single-osculum explants of the demosponge Halichondria panicea − a mechanism to protect and clean the sponge filter-pump? BSc thesis, University of Southern Denmark.

Lüskow F, Riisgård HU, Solovyeva V, Brewer JR. (2019). Seasonal changes in bacteria and phytoplankton biomass control the condition index of the demosponge Halichondria panicea in temperate Danish waters. Marine Ecology Progress Series, 608, pp. 119-123. doi: 10.3354/meps12785

Lüskow F, Kløve-Mogensen K, Tophøj J, Pedersen LH, Riisgård HU, Eriksen NT. (2019). Seasonality in lipid content of the demosponges Halichondria panicea and H. bowerbanki at two study sites in temperate Danish waters. Frontiers in Marine Science - Aquatic Physiology, 6, pp. 328. doi: 10.3389/fmars.2019.00328

Mills DB, Canfield DE. (2017). A trophic framework for animal origins. Geobiology, 15(2), pp. 197-210. doi: 10.1111/gbi.12216

Mills DB, Francis WR, Vargas S, Larsen M, Elemans CPH, Canfield DE, ... Wörheide G. (2018). The last common ancestor of animalslacked the HIF pathway and respired inlow-oxygen environments. eLIFE, 7, pp. e31176. doi: 10.7554/eLife.31176.001

Mills DB, Francis WR, Canfield DE. (2018). Animal origins and the Tonian Earth system. Emerging Topics in Life Sciences, 2(2), pp. 289-298. doi: 10.1042/ETLS20170160

Myrhøj Jensen R. (2019). Changes in bacterial community composition in developing explants of the demosponge Halichondria panicea. BSc thesis, Aarhus University.

Nielsen LT, Asadzadeh SS, Dölger J, Walther JH, Kiørboe T, Andersen A. (2017). Hydrodynamics of microbial filter feeding. Proceedings of the National Academy of Sciences of the United States of America, 114(35), pp. 9373-9378. doi: 10.1073/pnas.1708873114

Petersen SR. (2017). Flow measurements on sea sponges. BSc thesis, DTU Copenhagen.

Plese B, Rossi ME, Kenny N, Taboada S, Koutsouveli V, Riesgo A. (2019). Trimitomics: An efficient pipeline for mitochondrial assembly from transcriptomic reads in non-model species. Molecular Ecology Resources, 19(5), pp. 1230-1239. doi: 10.1111/1755-0998.13033

Riisgård HU, Kumala L, Charitonidou K. (2016). Using the F/R -ratio for an evaluation of the ability of the demosponge Halichondria panicea to nourish solely on phytoplankton versus free-living bacteria in the sea. Marine Biology Research, (9), pp. 907-912. doi: 10.1080/17451000.2016.1206941

Roulund Buur L. (2019). Filter-feeding behaviour, growth and bioenergetics of the demosponge Halichondria panicea, with focus on a possible energy-saving mechanism during low-food periods. MSc thesis, University of Southern Denmark.

Taboada S, Riesgo A, Serra Silva A, Neal L, Cristobo J, Sherlock E, ... Ríos P. (2019). Insights into the symbiotic relationship between scale worms and carnivorous sponges (Cladorhizidae, Chondrocladia). Deep Sea Research Part I: Oceanographic Research Papers, pp. 103191. doi: 10.1016/j.dsr.2019.103191

Tophøj J, Wollenberg RD, Søndergaard TE, Eriksen NT (2018) Feeding and growth of the marine heterotrophic nanoflagellates, Procryptobia sorokini and Paraphysomonas imperforata on a bacterium, Pseudoalteromonas sp. with an inducible defence against grazing. PLoS ONE 13: e0195935, 1-13 

Tophøj J. (2017) Growth studies and isolation of four heterotrophic flagellates. MSc thesis, Aalborg University 


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